It has to be one of these. 
I've listened in Stereo and Mono. 
I'm not 100% but I believe some 
of the extra notes are other guitars.
I'm guessing the 1st version is correct. 
Just because it's relative to the chord changes. 
Also seems the last note in the measure is held a second long or accented.

(P Muted )

 Capo 1 (all notes relative to capo)
    Bm      G       D     A
E|----------------------------|
B|------------3---------3P2---|
G|------4-------0-----2-----2-|
D|----4---4--0------0---------|
A|--2-------------------------|
E|----------3-----------------|



Capo 1 (all notes relative to capo)
      Bm      G       D     A
E|----------------------------|
B|------------3---------3-2---|
G|------4-------0-----2-----2-|
D|----4---4--0------0---------|
A|--2-------------------------|
E|----------3-----------------|